SIF conceptual fig
Key steps linking chlorophyll fluorescence with photosynthesis. (a, d) Step 1: The light reactions of photosynthesis, describing the possible fate of an absorbed photon as nonphotochemical quenching (NPQ), photochemical quenching (PQ), or released as fluorescence. NPQ, PQ, and fluorescence are often described in terms of the “quantum yields,” or the probability a photon will take a given pathway. Panel (d) is adapted from Maguire et al., 2020 and represents our best theoretical understanding of the ΦP: ΦF relationship (Porcar‐Castell et al., 2014; van der Tol et al., 2014). (b, e) Step 2: The carbon reactions of photosynthesis, which highlights the different controls on the eventual assimilation of CO2 into sugars. The theoretical leaf level response of measured SIF (with a spectrometer) and photosynthesis from a gas exchange instrument resembles findings from He et al. (2020). Note that for a given change in photosynthesis, the relative change in SIFyield (SIF at the same light level) is much smaller. (c, f 

New paper on the co-variation of photosynthesis and chlorophyll fluorescence across scales

When exposed to light, plants re‐emit a small amount of light from chlorophyll molecules called fluorescence. Remote sensing instruments are now capable of measuring chlorophyll fluorescence (which is emitted between 650–850 nm) from canopies to the globe (solar‐induced chlorophyll fluorescence; SIF). A growing number of papers have highlighted an empirical linear relationship between SIF and whole‐ecosystem photosynthesis (gross primary productivity; GPP). These advances have excited the broader Earth science research community, but recent studies have pointed out that the linear SIF‐GPP relationship at coarse scales does not hold true at smaller spatiotemporal scales. In this commentary, we synthesize three recent studies that provide insight into the relationship between fluorescence and photosynthesis at leaf and canopy scales, under natural and controlled conditions. At fine spatiotemporal scales, fluorescence can be decoupled with photosynthetic carbon uptake, but we argue that satellite measurements are often too coarse in time and space to observe the SIF‐photosynthesis decoupling and that the integration of canopy processes explains the observed linearity. As such, SIF plays an important role as an estimate of GPP at spatial and temporal scales relevant for monitoring global terrestrial productivity, benchmarking terrestrial biosphere and earth system models, and managing ecosystems.